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Species belonging to selected taxon:
Cynodon dactylon
,
Eragrostis curvula
,
Panicum virgatum
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Cenchrus ciliaris
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST002583
species:
Saccharum officinarum
miRNA family:
MIR437
source:
miRNEST
Taxonomy by NCBI:
Saccharum officinarum
Saccharum officinarum complex
Saccharum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGAAATTTGACTTAGGACAAA
miRNA*
TATGCCAAGTCAAACATCTTT
mismatches:
4
bulges:
2
View larger
pre-miRNA
ACTACTGAAGTTACTTACTCCCTTTGTTCCAAATTATAGTTCACTTTGGCTT
TATGCCAAGTCAAACATCTTT
TAAGTTCGACCAAGTTTATAGAAAAAG
CCACCAACATCCACAAGATCAAATTAGTTTTATTAAATTATCCATGGAATATGTTTTCATAAACTGTAGATGTTACTATATATTTTTTTTTCTAAAAACT
TGGTCTTTAG
GGAAATTTGACTTAGGACAAA
CCTAAAGGGAACTATATTTTGGAATGGAGAGAGAGTATATTGTAAGTTA
dot-bracket secondary structure
.......((.((((.(((((.((((((((((((.((((((((.((((((.((
(...((((((((((..(((((
.......((((((((((.(((((((((
.....((((((.(((.(((.((.(((((...))))).))))).((((((.....))))))....))).))))))...........))))))))).)))))
)))))...))
)))..)))))))).))..)))
.)))))).)))))))).))))))))))))...)))))....)))).)).
SIMILARITIES
miRBase
bdi-MIR5169
:
0.00000002
PMRD
zma-miR437e
:
0.0000009
microPC
miR437
:
0.00000006
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record